Functional analysis of DNA and chromatin - Info and Reading Options

"Functional analysis of DNA and chromatin" Table Of Contents:

• 1- Predictive binding geometry of ligands to DNA minor groove : isohelicity and hydrogen-bonding pattern -- Juan C. Stockert
• 2- Using microchip gel electrophoresis to probe DNA-drug binding interactions -- Nan Shi and Victor M. Ugaz
• 3- Identifying different types of chromatin using Giemsa staining -- Juan C. Stockert, Alfonso Blázquez-Castro, and Richard W. Horobin
• 4- Analysis of DNA damage and repair by comet fluorescence in situ hybridization (comet-FISH) -- Michael Glei and Wiebke Schlörmann
• 5- Alkaline nuclear dispersion assays for the determination of DNA damage at the single cell level -- Piero Sestili and Carmela Fimognari
• 6- Polarization microscopy of extended chromatin fibers -- Maria Luiza S. Mello and Benedicto de Campos Vidal
• 7- DNA labeling in vivo : quantification of epidermal stem cell chromatin content in whole mouse hair follicles using Fiji image processing software -- Elisa Carrasco, María I. Calvo, and Jesús Espada
• 8- Historical overview of bromo-substituted DNA and sister chromatid differentiation -- Roberto Mezzanotte and Mariella Nieddu
• 9- Image analysis of chromatin remodelling -- Benedicto de Campos Vidal, Marina B. Felisbino, and Maria Luiza S. Mello
• 10- FISH methods in cytogenetic studies -- Miguel Pita ... [et al.]
• 11- Ultrastructural and immunofluorescent methods for the study of the XY body as a biomarker -- Roberta B. Sciurano and Alberto J. Solari
• 12- Atomic force microscopy for analyzing metaphase chromosomes : comparison of AFM images with fluorescence labeling images of banding patterns -- Osamu Hoshi and Tatsuo Ushiki
• 13- Selective detection of phagocytic phase of apoptosis in fixed tissue sections -- Vladimir V. Didenko
• 14- Selective transport of cationized fluorescent topoisomerase into nuclei of live cells for DNA damage studies -- Candace L. Minchew and Vladimir V. Didenko
• 15- Visualization and interpretation of eukaryotic DNA replication intermediates in vivo by electron microscopy -- Kai J. Neelsen ... [et al.]
• 16- Combined bidimensional electrophoresis and electron microscopy to study specific plasmid DNA replication intermediates in human cells -- Cindy Follonier and Massimo Lopes
• 17- Standard DNA methylation analysis in mouse epidermis : bisulfite sequencing, methylation-specific PCR, and 5-methyl-cytosine (5mC) immunological detection -- Jesús Espada, Elisa Carrasco, and María I. Calvo
• 18- Methyl-combing : single-molecule analysis of DNA methylation on stretched DNA fibers -- Attila Németh
• 19- Investigating 5-hydroxymethylcytosine (5hmC) : the state of the art -- Colm E. Nestor ... [et al.]
• 20- Hydroxymethylated DNA immunoprecipitation (hmeDIP) -- Colm E. Nestor and Richard R. Meehan
• 21- Microscale thermophoresis for the assessment of nuclear protein-binding affinities -- Wei Zhang ... [et al.]
• 22- Analysis of histone posttranslational modifications from nucleolus-associated chromatin by mass spectrometry -- Stefan Dillinger ... [et al.]
• 23- Salt-urea, sulfopropyl-sepharose, and covalent chromatography methods for histone isolation and fractionation -- Pedro Rodriguez-Collazo ...[et al.]
• 24- Chromatin immunoprecipitation -- Javier Rodríguez-Ubreva and Esteban Ballestar
• 25- Analysis of chromatin composition of repetitive sequences : the ChIP-Chop assay -- Raffaella Santoro
• 26- Purification of specific chromatin domains from single- copy gene loci in Saccharomyces cerevisiae -- Stephan Hamperl ... [et al.]
• 27- Deep sequencing of small chromatin-associated RNA : isolation and library preparation -- Sarah Daniela Diermeier, Thomas Schubert, and Gernot Längst
• 28- Deep sequencing of small chromatin-associated RNA : bioinformatic analysis -- Sarah Daniela Diermeier and Gernot Längst.

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