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Intro -- CROSSING IN COMPLEXITY: INTERDISCIPLINARY APPLICATION OF PHYSICS IN BIOLOGICAL AND SOCIAL SYSTEMS -- CROSSING IN COMPLEXITY: INTERDISCIPLINARY APPLICATION OF PHYSICS IN BIOLOGICAL AND SOCIAL SYSTEMS -- CONTENTS -- FOREWORD -- Chapter 1 LIVING WITH RADICAL UNCERTAINTY: THE EXEMPLARY CASE OF FOLDING PROTEIN -- Abstract -- 1. "ZIP Filing the World" -- 2. The Folding Problem -- 3. Radical Emergence: Pyrococcus Furiosus -- 4. Uncertainty's Fecundity: A Systemic Conclusion -- Acknowledgments -- References -- Chapter 2 THE LIMITS OF ATOMISM: THE BOHM WAY OF A NEW ONTOLOGY -- Abstract -- Brief History of Atomism -- Necessity of the New Ontology -- Philosophical Viewpoint from Substance to Function -- Process and the Cyclic Ontology -- Mathematical Formalism of Cyclic Ontology -- The Heisenberg Equation -- The Bohm Equation -- Conclusion -- References -- Chapter 3 DOING MATHEMATICS ABOUT AND WITH THE BRAIN* -- Introduction -- Doing Mathematics about the Brain -- Hodgkin and Huxley -- Warren McCulloch -- Brains, Machines and Mathematics -- The Automata-Theoretic Approach to Brain Theory -- The Many Levels of Brain Analysis -- Below the Neuron -- Population Coding and the Ergodic Hypothesis -- Cooperative Computation in Neural Fields -- Regularization -- Schema Theory -- Synthetic PET -- Space, The Final Frontier -- Information Theory and Statistical Mechanics -- Nonlinear Dynamic Systems -- Bringing in Plasticity: Hebbian, Error-Based and Reinforcement -- Bridging the Levels: From Behavior to Neurochemistry -- Self-Organization -- Brain Evolution -- From Brain to Mind: Psychology and Linguistics -- The Brain Doing Mathematics -- Against Platonism -- References -- Chapter 4 PHYSICS OF LIFE FROM FIRST PRINCIPLES -- Abstract -- 1. Introduction -- 2. Dynamics with Liouville Feedback -- A. Destabilizing Effect of Liouville feedback

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